MirGeneDB 3.0

39 microRNA genes with seed AAUCUCU

						Sort by genome coordinates								Motifs
MirGeneDB ID ▼	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Pma-Mir-216-P2a2	None	MIR-216	AAUCUCU	None	None	NC_046097.1	6164884	6164943	-	Cyclostomata	Nephrozoa		Unknown			1
Ebu-Mir-216-P2a2	None	MIR-216	AAUCUCU	None	None	FYBX02005270.1	1704272	1704341	-	Cyclostomata	Nephrozoa		No
Pma-Mir-216-P2a1	pma-mir-216b	MIR-216	AAUCUCU	MIMAT0019527	None	NC_046074.1	1955059	1955119	-	Cyclostomata	Nephrozoa		Unknown			1
Tni-Mir-216-P2a	tni-mir-216b	MIR-216	AAUCUCU	MIMAT0002976	None	17	5747094	5747154	+	Vertebrata	Nephrozoa		Unknown			1
Tgu-Mir-216-P2a	tgu-mir-216b	MIR-216	AAUCUCU	MIMAT0014593	MIMAT0027018	3	86155263	86155324	-	Vertebrata	Nephrozoa		No		1
Sto-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	BFAA01001329.1	91747	91807	+	Vertebrata	Nephrozoa		No
Spt-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	QEPC01007720.1	909085	909146	+	Vertebrata	Nephrozoa		Unknown		1
Sha-Mir-216-P2a	sha-mir-216b	MIR-216	AAUCUCU	MIMAT0022776	None	GL834734.1	1003794	1003855	+	Vertebrata	Nephrozoa		No		1	1
Rno-Mir-216-P2a	rno-mir-216b	MIR-216	AAUCUCU	MIMAT0017846	MIMAT0017847	chr14	113101097	113101158	+	Vertebrata	Nephrozoa		No		1
Pbv-Mir-216-P2a	pbv-mir-216b	MIR-216	AAUCUCU	MIMAT0039024	MIMAT0039025	KE953947.1	188163	188223	+	Vertebrata	Nephrozoa		Unknown		1	1
Pab-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	CM054691.2	76382099	76382160	+	Vertebrata	Nephrozoa		Unknown		1
Ocu-Mir-216-P2a	ocu-mir-216b	MIR-216	AAUCUCU	MIMAT0048343	MIMAT0048344	chr2	130089612	130089673	+	Vertebrata	Nephrozoa		No		1
Oan-Mir-216-P2a	oan-mir-216b	MIR-216	AAUCUCU	MIMAT0029020	MIMAT0029021	NC_041736.1	56800547	56800608	+	Vertebrata	Nephrozoa		Yes		1
Neu-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	CM051813.1	650193818	650193879	+	Vertebrata	Nephrozoa		Unknown		1	1
Mmu-Mir-216-P2a	mmu-mir-216b	MIR-216	AAUCUCU	MIMAT0003729	MIMAT0017233	chr11	28746204	28746265	+	Vertebrata	Nephrozoa		No		1
Mmr-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	CM007664.1	3914474	3914535	-	Vertebrata	Nephrozoa		Unknown		1
Mml-Mir-216-P2a	mml-mir-216b	MIR-216	AAUCUCU	MIMAT0006243	None	CM014348.1	52658963	52659024	+	Vertebrata	Nephrozoa		No		1
Mdo-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	1	638478427	638478488	+	Vertebrata	Nephrozoa		Unknown		1	1
Mal-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	KV884748.1	2100782	2100842	+	Vertebrata	Nephrozoa		Unknown
Loc-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	LG16	3940971	3941030	+	Vertebrata	Nephrozoa		No
Lch-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	JH127673.1	301830	301893	+	Vertebrata	Nephrozoa		Unknown
Laf-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	GL010079.1	6045430	6045491	+	Vertebrata	Nephrozoa		Unknown		1
Hsa-Mir-216-P2a	hsa-mir-216b	MIR-216	AAUCUCU	MIMAT0004959	MIMAT0026721	chr2	56000724	56000785	-	Vertebrata	Nephrozoa		No		1
Gmo-Mir-216-P2a	gmo-mir-216b	MIR-216	AAUCUCU	MIMAT0044331	None	scaffold03540	796	858	-	Vertebrata	Nephrozoa		Unknown			1
Gja-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	NW_015252653.1	213	273	+	Vertebrata	Nephrozoa		Unknown		1
Gga-Mir-216-P2a	gga-mir-216b	MIR-216	AAUCUCU	MIMAT0007748	None	3	350639	350700	-	Vertebrata	Nephrozoa		No		1
Ete-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	JH980337	15854854	15854915	+	Vertebrata	Nephrozoa		No
Eca-Mir-216-P2a	eca-mir-216b	MIR-216	AAUCUCU	MIMAT0013073	None	CM009162.1	45348559	45348620	+	Vertebrata	Nephrozoa		Unknown		1
Dre-Mir-216-P2a	dre-mir-216b	MIR-216	AAUCUCU	MIMAT0001867	None	chr22	28780265	28780323	-	Vertebrata	Nephrozoa		No		1
Dno-Mir-216-P2a	dno-mir-216b	MIR-216	AAUCUCU	MIMAT0047764	MIMAT0047765	JH567881	186854	186915	-	Vertebrata	Nephrozoa		Unknown		1
Cpo-Mir-216-P2a	cpo-mir-216b	MIR-216	AAUCUCU	MIMAT0047121	MIMAT0047122	scaffold_48	8638120	8638180	+	Vertebrata	Nephrozoa		No		1	1
Cpi-Mir-216-P2a	cpi-mir-216b	MIR-216	AAUCUCU	MIMAT0037844	None	JH584878	229316	229377	-	Vertebrata	Nephrozoa		No		1
Cmi-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	KI635877.1	5032184	5032244	+	Vertebrata	Nephrozoa		No
Cli-Mir-216-P2a	cli-mir-216b	MIR-216	AAUCUCU	MIMAT0038598	MIMAT0038599	scaffold628	125966	126027	+	Vertebrata	Nephrozoa		No		1
Cja-Mir-216-P2a	None	MIR-216	AAUCUCU	None	None	CM021928.1	56248008	56248069	+	Vertebrata	Nephrozoa		Unknown		1
Cfa-Mir-216-P2a	cfa-mir-216b	MIR-216	AAUCUCU	MIMAT0006592	None	chr10	56772853	56772914	-	Vertebrata	Nephrozoa		No		1
Bta-Mir-216-P2a	bta-mir-216b	MIR-216	AAUCUCU	MIMAT0009266	None	NC_037338.1	38657092	38657153	-	Vertebrata	Nephrozoa		No		1
Ami-Mir-216-P2a	ami-mir-216b	MIR-216	AAUCUCU	MIMAT0038243	MIMAT0038244	NW_017713592.1	3406274	3406335	-	Vertebrata	Nephrozoa		Unknown		1
Aca-Mir-216-P2a	aca-mir-216b	MIR-216	AAUCUCU	MIMAT0021876	MIMAT0021877	1	256248887	256248949	-	Vertebrata	Nephrozoa		No		1

(red - mature/co-mature, blue - star)

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