10           20        30        40        50        60  
AUCCUGGAUCUAUGUAG---|     G    C            UU           GUGCAAG 
                    GCAGUU UGCU CUGUAAACAUCC  GACUGGAAGCU       G
                    CGUCGG ACGG GACAUUUGUAGG  CUGACUUUCGG       C
CACCAAAGUCCUCCUUGCGU^     -    C            --           GGAAACU 
  120       110       100         90          80        70