10        20          30        40         50         
AGUCCUGCUUUAAACCAAGUUU--|     CAU          U  A-       GUAACA 
                        UCAGUU   GUAAACAUCC AC  CUCAGCU      C
                        AGUCGA   CAUUUGUAGG UG  GGGUCGG      A
GCACAAUUACCGACUGUCAGGUUC^     CUU          -  GA       CUGAGC 
.       110       100        90        80         70        60