10        20         30        40        50        60 
UCUGCCGUGACUAAUCAUGGCAC-|    U     UG   A   C     G    AGGUGA 
                        CUCCA UUCCC  AGG GCC UUUGA CCUG      A
                        GAGGU AAGGG  UCC CGG GAACU GGAC      A
GAACGAGGUCUUCAAUUAUGAGAA^    C     --   G   A     -    AAAAAA 
.       110       100        90          80         70