| MirGeneDB ID | Aae-Mir-1890 |
|---|
| Family name |
MIR-1890 (all species) |
|---|
| Species |
Yellow fever mosquito (Aedes aegypti) |
|---|
| MiRBase ID |
aae-mir-1890
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aga-Mir-1890
|
|---|
| Node of Origin (locus) |
Culicidae
|
|---|
| Node of Origin (family) |
Culicidae
|
|---|
Genome context
(Aaeg_L3) |
supercont1.204: 1733314-1733377 [+]
Ensembl
|
|---|
| Seed |
GAAAUCU |
|---|
Precursor
(pre-Mir +30nt flank) |
AGCAGUGAUCAAGGAUAUCGACAUACGGCUAGAGCUAAUUGGAGAGUUCUUGAAUAGUGUUGUGAACCUUCAUGAAAUCUUUGAUUAGGUCUGGUCGUGGUGGUUUAUCAACGCGUUGGAUUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGCAGUGAUCAAGGAUAUCGA- -| G UG G U AAUAGUGU
CA UACGGCUAGA CUAAU GAGA UUC UG U
GU GUGCUGGUCU GAUUA UUCU AAG AC G
UCUUAGGUUGCGCAACUAUUUG G^ G GU A U UUCCAAGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Aae-Mir-1890_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGAGCUAAUUGGAGAGUUCUUG -22
Get sequence
|
|---|
| Mature sequence |
Aae-Mir-1890_3p |
| mirBase accession | MIMAT0014247 |
|---|
| Sequence |
42- UGAAAUCUUUGAUUAGGUCUGG -64
Get sequence
|
|---|
