MirGeneDB 3.0
MirGeneDB ID

Asp-Mir-2023

Family name MIR-2023 (all species)
Species Deep-sea anemone (Actinernus sp.)
MiRBase ID
Paralogues
Orthologues Adi-Mir-2023-P1-v1  Adi-Mir-2023-P2-v1  Nve-Mir-2023 
Node of Origin (locus) Hexacorallia
Node of Origin (family) Hexacorallia
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic)		 JAOWCC010001368.1: 50318500-50318553 [+] Ensembl
Seed AAGAAGU
Precursor
(pre-Mir +30nt flank)		 
UGACUGCCGGAUUGCGUGACAUGUCUGUUUCUGCUGCUUGUGCUUCUGUCACAUUAACUGAUGAAAGAAGUACAAGUGGUAGGGGAGGGCAUGUCCAUAACCAGGAAUUUACAG
Get precursor sequence
Structure
        10          20        30        40        50      
UGACUGCCGGAUUGCGU--|        G UU    UG           G   CAUU 
                   GACAUGUCU U  CUGC  CUUGUGCUUCU UCA    A
                   CUGUACGGG G  GAUG  GAACAUGAAGA AGU    A
GACAUUUAAGGACCAAUAC^        A GG    GU           A   AGUC 
  110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Te Te Tr Tr
Star sequence

Asp-Mir-2023_5p*
mirBase accessionNone
Sequence 
0- CUGCUGCUUGUGCUUCUGUCA -21
Get sequence
Mature sequence

Asp-Mir-2023_3p
mirBase accessionNone
Sequence 
33- AAAGAAGUACAAGUGGUAGGG -54
Get sequence