| MirGeneDB ID | Asu-Mir-77 |
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| Family name |
MIR-77 (all species) |
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| Species |
Large roundworm (Ascaris suum) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cbr-Mir-77-P1
Cbr-Mir-77-P2
Cel-Mir-77
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| Node of Origin (locus) |
Chromadorea
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| Node of Origin (family) |
Chromadorea
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Genome context
(ASU_PRJNA80881_plustraces) |
Scaffold523: 78463-78521 [-]
|
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| Seed |
UCAUCAG |
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Precursor
(pre-Mir +30nt flank) |
AAAAAAACCUGAAAUUAUCGAUUAUUCGCAGCCUAAAAUUGACCGAUGAGAUUUGUAUUUGAAUAUUUCAUCAGGCCAAUUUUAGUCUUCGAUGAACGAUUUUCAUUCCUCUUACGCCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAAAAACCUGAAAUUA---| A U C C A - UUGUA
UCG UUAU CG AG CUAAAAUUG CC GAUGAGAU U
AGC AGUA GC UC GAUUUUAAC GG CUACUUUA U
ACCGCAUUCUCCUUACUUUU^ A - U U C A UAAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ce |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
La |
Ov |
Se |
Sp |
Te |
Zy |
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| Star sequence |
Asu-Mir-77_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GCCUAAAAUUGACCGAUGAGAU -22
Get sequence
|
|---|
| Mature sequence |
Asu-Mir-77_3p |
| mirBase accession | None |
|---|
| Sequence |
36- UUCAUCAGGCCAAUUUUAGUCUU -59
Get sequence
|
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