| MirGeneDB ID | Asu-Novel-2 |
|---|
| Family name |
ASU-NOVEL-2 (all species) |
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| Species |
Large roundworm (Ascaris suum) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A.suum
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| Node of Origin (family) |
A.suum
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Genome context
(ASU_PRJNA80881_plustraces) |
Scaffold142: 201065-201123 [-]
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| Seed |
UUUGAUC |
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Precursor
(pre-Mir +30nt flank) |
UCAUUUUGAUCUCUAUUUUGACCUAUUUUCAUUUGAUCGAUCUUCAUUCUGAUAAAAGUGAAAAUCAAAAUGAAGACUGUUCAAAAUGAAAAUAGAUCAAAACGAAAGUAGAUGAAAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCAUUUUGAUCUCUAUU-- C -| U A C UAAAA
UUGA CUAUUUUCA UUUGA CG UCUUCAUU UGA G
AACU GAUAAAAGU AAACU GU AGAAGUAA ACU U
CAAAAGUAGAUGAAAGCAA A A^ U C A AAAAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ce |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
La |
Ov |
Se |
Sp |
Te |
Zy |
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| Mature sequence |
Asu-Novel-2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUUUGAUCGAUCUUCAUUCUGA -22
Get sequence
|
|---|
| Co-mature sequence |
Asu-Novel-2_3p |
| mirBase accession | None |
|---|
| Sequence |
36- AAAAUGAAGACUGUUCAAAAUGA -59
Get sequence
|
|---|
