MirGeneDB 3.0
MirGeneDB ID

Bfl-Mir-12492

Family name MIR-12492 (all species)
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID
Paralogues
Orthologues Bla-Mir-12492 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049982.1: 15812188-15812247 [-] UCSC
Seed CAUGAUA
Precursor
(pre-Mir +30nt flank)		 
GAACGAGACUGCCAUUUUCCCGCGGUCGGGUACUGUGUCCUUCCAUCAUAGUGUGUUUCUAUACGUCACCAUGAUACAGGACACAGUCCCUGACUGUGGGACCAAGCACGGCCGUGGCAA
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Structure
        10          20        30        40        50          
GAACGAGACUGCCAUUU--|            U          UCC     A   UGUUUC 
                   UCCCGCGGUCGGG ACUGUGUCCU   AUCAU GUG      \
                   AGGGUGUCAGUCC UGACACAGGA   UAGUA CAC      U
AACGGUGCCGGCACGAACC^            C          CA-     C   UGCAUA 
.       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
- +
To
Star sequence

Bfl-Mir-12492_5p* (predicted)
mirBase accessionNone
Sequence 
0- UACUGUGUCCUUCCAUCAUAGUG -23
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Mature sequence

Bfl-Mir-12492_3p (predicted)
mirBase accessionNone
Sequence 
38- CCAUGAUACAGGACACAGUCCC -60
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