| MirGeneDB ID | Bfl-Mir-2076 |
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| Family name |
MIR-2076 (all species) |
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| Species |
Florida lancelet (Branchiostoma floridae) |
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| MiRBase ID |
bfl-mir-2076
|
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| Paralogues |
|
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| Orthologues |
Bla-Mir-2076
|
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| Node of Origin (locus) |
Branchiostoma
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| Node of Origin (family) |
Branchiostoma
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Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic) |
NC_049986.1: 19602353-19602409 [+]
UCSC
|
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| Seed |
AUUGCAC |
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Precursor
(pre-Mir +30nt flank) |
AAAGAGGACAACGAGAAACGGUUGUGGUAGAAUUGCACUAGAGUGAUUUGUUGAUUUUUGGGCAUCAAAUCACUUCAGUGCAGUUCUCUCACAGCUUGUACAAGUCAUCCAGCGAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAGAGGACAACGAGAA- -| GU AG UUGAUUU
AC GGUUGUG AGAAUUGCACU AGUGAUUUG \
UG UCGACAC UCUUGACGUGA UCACUAAAC U
GUAGCGACCUACUGAACA U^ UC CU UACGGGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Bfl-Mir-2076_5p |
| mirBase accession | MIMAT0010005 |
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| Sequence |
0- AAUUGCACUAGAGUGAUUUGUU -22
Get sequence
|
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| Star sequence |
Bfl-Mir-2076_3p* |
| mirBase accession | MIMAT0019175 |
|---|
| Sequence |
35- CAAAUCACUUCAGUGCAGUUCU -57
Get sequence
|
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