| MirGeneDB ID | Bfl-Mir-4864 |
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| Family name |
MIR-4864 (all species) |
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| Species |
Florida lancelet (Branchiostoma floridae) |
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| MiRBase ID |
bfl-mir-4864
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| Paralogues |
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| Orthologues |
Bla-Mir-4864
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| Node of Origin (locus) |
Branchiostoma
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| Node of Origin (family) |
Branchiostoma
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Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic) |
NC_049979.1: 27696682-27696744 [-]
UCSC
|
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| Seed |
AGCCAGA |
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Precursor
(pre-Mir +30nt flank) |
CGCCCAUGGAGUGAGCCCUGUCUCUGGUGUAGGGAGAUCACCUCAGGCGUACAGUCUUGUCAUGUAGCAUGUAGCCAGACCUGAUCUCCCUGCAGCGGCUGCAGUUCUACAGCAUGUGGAUGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CGCCCAUGGAGUGAGCC--| CU G CC A G GUCUUGU
CUGU CUG UGUAGGGAGAUCA UC GGC UACA C
GACG GGC ACGUCCCUCUAGU AG CCG AUGU A
GGUAGGUGUACGACAUCUU^ UC G CC A - ACGAUGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Bfl-Mir-4864_5p* |
| mirBase accession | MIMAT0020097 |
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| Sequence |
0- AGGGAGAUCACCUCAGGCGUACA -23
Get sequence
|
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| Mature sequence |
Bfl-Mir-4864_3p |
| mirBase accession | MIMAT0020098 |
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| Sequence |
41- UAGCCAGACCUGAUCUCCCUGC -63
Get sequence
|
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