| MirGeneDB ID | Bla-Mir-4886 |
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| Family name |
MIR-4886 (all species) |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bfl-Mir-4886
|
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
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Genome context
(BraLan2) |
Sc0000119: 923837-923895 [-]
Ensembl
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| Seed |
UUGCCGA |
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Precursor
(pre-Mir +30nt flank) |
CUCGGCAGACUUCGUGUUCCUCCGGCCCCGUUCGAGACGGACUCGGCAGACGUUCGCGUCUCUCUUGUUUGCCGAACCCGUUUUGAAUGGGGUCGUGUGGAAAAAGCACCGAGGAGCAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUCGGCAGACUUCGUGU- UC-| AC UUCGCG
UCC CGGCCCCGUUCGAGACGG UCGGCAGACG \
AGG GCUGGGGUAAGUUUUGCC AGCCGUUUGU U
UACGAGGAGCCACGAAAA UGU^ CA UCUCUC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Bla-Mir-4886_5p* |
| mirBase accession | None |
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| Sequence |
0- UUCGAGACGGACUCGGCAGACG -22
Get sequence
|
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| Mature sequence |
Bla-Mir-4886_3p |
| mirBase accession | None |
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| Sequence |
37- UUUGCCGAACCCGUUUUGAAUG -59
Get sequence
|
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