| MirGeneDB ID | Bla-Novel-1 |
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| Family name |
BLA-NOVEL-1 (all species) |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. lanceolatum
|
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| Node of Origin (family) |
B. lanceolatum
|
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Genome context
(BraLan2) |
Sc0000002: 280150-280207 [-]
Ensembl
|
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| Seed |
CAACGAA |
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Precursor
(pre-Mir +30nt flank) |
GGAACUCUAGUUUCAAUUGCACUGGGUUCCUAUUGCACUCGGUUCGUUGUUGCCAACGUCCGUACAACAACGAACCGUGUGCAGUAGAUACAGAGUGCAAUAUAACUACAUGUACUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGAACUCUAGUUUCAAU--| GG UC U CCAAC
UGCACU GU CUAUUGCAC CGGUUCGUUGUUG G
ACGUGA CA GAUGACGUG GCCAAGCAACAAC U
UAUCAUGUACAUCAAUAUA^ GA UA U AUGCC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Bla-Novel-1_5p* |
| mirBase accession | None |
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| Sequence |
0- UAUUGCACUCGGUUCGUUGUUG -22
Get sequence
|
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| Mature sequence |
Bla-Novel-1_3p |
| mirBase accession | None |
|---|
| Sequence |
36- ACAACGAACCGUGUGCAGUAGA -58
Get sequence
|
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