| MirGeneDB ID | Bta-Mir-2285-P10 |
| Family name |
MIR-2285 (all species) |
| Species |
Cow (Bos taurus) |
| MiRBase ID |
|
| Paralogues |
Bta-Mir-2285-P1
Bta-Mir-2285-P2
Bta-Mir-2285-P3
Bta-Mir-2285-P4
Bta-Mir-2285-P5
Bta-Mir-2285-P6
Bta-Mir-2285-P7
Bta-Mir-2285-P8
Bta-Mir-2285-P9
Bta-Mir-2285-P11
|
| Orthologues |
|
| Node of Origin (locus) |
B. taurus
|
| Node of Origin (family) |
B. taurus
|
Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037333.1: 46328888-46328946 [+]
UCSC
Ensembl
|
| Seed |
AAACCUG |
Precursor (pre-Mir +30nt flank) |
UUUCCUCUGUUGCACAGUAUUGGGUUGGCUAAAAAGUUUGUUUGGGGUUUUCAUUACAUCUUACGGAAAAACCUGAAUGAACUUAUUGGCCAACUCAAUACAUGCUUGAUCCUGUCUUA
Get precursor sequence
|
| Structure | 10 20 30 40 50
UUUCCUCUGUUGCACAG--| A UG UG G AUUACA
UAUUGGGUUGGCUAA AAGUU UU GG UUUUC \
AUAACUCAACCGGUU UUCAA AA CC AAAAG U
AUUCUGUCCUAGUUCGUAC^ A GU GU A GCAUUC
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
Yes
|
| Motifs | No |
Tissue expression
|
| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Star sequence |
Bta-Mir-2285-P10_5p* |
| mirBase accession | None |
| Sequence |
0- AAAAAGUUUGUUUGGGGUUUUC -22
Get sequence
|
| Mature sequence |
Bta-Mir-2285-P10_3p |
| mirBase accession | None |
| Sequence |
37- AAAACCUGAAUGAACUUAUUGG -59
Get sequence
|