| MirGeneDB ID | Bta-Mir-2328 |
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| Family name |
MIR-2328 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-2328
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. taurus
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| Node of Origin (family) |
B. taurus
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037345.1: 39215927-39215988 [+]
UCSC
Ensembl
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| Seed |
CCCCCUC |
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Precursor
(pre-Mir +30nt flank) |
GGGACCAGGCUGAGGAUGCAGGGGCUCCUCGCCCCCUCCCUUGGUCGCCGGCUGUUGGUCCUUUUGUCAGUCUGCGUCUGGGGAGGGGGCCAGGGGCUCAUUCUGGCCUGGGGGGCGGGGGC
Get precursor sequence
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| Structure | 10 20 30 40 50 60
GGGACCAGGCUGAGGAUGCAG--| C U U C UGUUGGUC
GGGCUCCU GCCCCCUCCCU GG CGC GGC \
CUCGGGGA CGGGGGAGGGG CU GCG CUG C
CGGGGGCGGGGGGUCCGGUCUUA^ C U - U ACUGUUUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14), UGUG in loop |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-2328_5p |
| mirBase accession | MIMAT0011857 |
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| Sequence |
0- GCCCCCUCCCUUGGUCGCCGGC -22
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-2328-5p
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| Star sequence |
Bta-Mir-2328_3p* (predicted) |
| mirBase accession | MIMAT0011858 |
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| Sequence |
41- CUGCGUCUGGGGAGGGGGCCA -62
Get sequence
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| Proposed targets |
TargetScanVert: bta-miR-2328-3p
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