| MirGeneDB ID | Bta-Mir-6119 |
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| Family name |
MIR-6119 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-6119
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| Paralogues |
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| Orthologues |
Eca-Mir-6119
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| Node of Origin (locus) |
Scrotifera
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| Node of Origin (family) |
Scrotifera
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 4150900-4150963 [-]
UCSC
Ensembl
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| Seed |
GAGGUAA |
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Precursor
(pre-Mir +30nt flank) |
GUGUGUUUUCCUUAGCCUGGAGUCAUUUUGAGAGGUAAAAAAUUGAUUUGACUAGUUCUUUAACACAUCUAGCAAAUCAUUUUUUACUCUCCAAAAAGAACUCCAAACUUGCUAAAGAAGGGAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GUGUGUUUUCCUUAGCC-- -| A A - U A AGUUCUUU
UGGAG UC UUUUG GAG GUAAAAAAU GAUUUG CU \
ACCUC AG AAAAC CUC CAUUUUUUA CUAAAC GA A
AAGGGAAGAAAUCGUUCAA A^ A - U - - UCUACACA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-6119_5p |
| mirBase accession | MIMAT0024588 |
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| Sequence |
0- AGAGGUAAAAAAUUGAUUUGACU -23
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-6119-5p
|
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| Star sequence |
Bta-Mir-6119_3p* |
| mirBase accession | MIMAT0024589 |
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| Sequence |
42- CAAAUCAUUUUUUACUCUCCAA -64
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-6119-3p
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