| MirGeneDB ID | Cbr-Mir-7583-P2 |
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| Family name |
MIR-7583 (all species) |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-7583b
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| Paralogues |
Cbr-Mir-7583-P1
Cbr-Mir-7583-P3
Cbr-Mir-7583-P4
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
X: 20377604-20377662 [+]
Ensembl
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| Seed |
CAUCCGA |
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Precursor
(pre-Mir +30nt flank) |
GUUGAUCUGCUUGAUAAAUAACGUUUUGUCAGUCACAAAUAUCGUGAUGGCAUUGAAAGGCAUCAUUGCCAUCCGACAUUUGUGGUUGACGAUGUGAUUUUUUUCAAUUUGCAAUUUUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GUUGAUCUGCUUGAUAAAUAA--| UU GU A U UUGAAA
CG UUGUCA CACAAAU UCG GAUGGCA G
GU AGCAGU GUGUUUA AGC CUACCGU G
UUUUUAACGUUUAACUUUUUUUA^ GU UG C - UACUAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-7583-P2_5p* |
| mirBase accession | None |
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| Sequence |
0- AGUCACAAAUAUCGUGAUGGCA -22
Get sequence
|
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| Mature sequence |
Cbr-Mir-7583-P2_3p |
| mirBase accession | MIMAT0029586 |
|---|
| Sequence |
38- CCAUCCGACAUUUGUGGUUGA -59
Get sequence
|
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