| MirGeneDB ID | Cbr-Mir-7588 |
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| Family name |
MIR-7588 (all species) |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-7588
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
X: 13128472-13128535 [+]
Ensembl
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| Seed |
AAACCGA |
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Precursor
(pre-Mir +30nt flank) |
AGUGGAUCUUUGGACACUAGACCUCACUAUGUAAGUUGUUGAUUGUGUUUCUUCCCAUAUUCAAAAUGAGGAAAACCGAUCAAUAAGCUUACAGAUUGUUCGACGAUAUGCCGAGUUGACUAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AGUGGAUCUUUGGACACUA----| CCU CUA - UG UCCCAUAU
GA CA UGUAAGUU GUUGAUUG UUUCU \
CU GU ACAUUCGA UAACUAGC AAAGG U
UGAUCAGUUGAGCCGUAUAGCAG^ U-- UAG A CA AGUAAAAC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-7588_5p* |
| mirBase accession | None |
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| Sequence |
0- GUAAGUUGUUGAUUGUGUUUCU -22
Get sequence
|
|---|
| Mature sequence |
Cbr-Mir-7588_3p |
| mirBase accession | MIMAT0029592 |
|---|
| Sequence |
41- AAAACCGAUCAAUAAGCUUACAG -64
Get sequence
|
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