| MirGeneDB ID | Cbr-Mir-7590 |
|---|
| Family name |
MIR-7590 (all species) |
|---|
| Species |
Roundworm (Caenorhabditis briggsae) |
|---|
| MiRBase ID |
cbr-mir-7590
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
C. briggsae
|
|---|
| Node of Origin (family) |
C. briggsae
|
|---|
Genome context
(CB4) |
V: 2734902-2734970 [+]
Ensembl
|
|---|
| Seed |
GGUCUUA |
|---|
Precursor
(pre-Mir +30nt flank) |
AACUCAUCAAGUGCAUAUCAAACCGUUUCUAGGUCUUAAAGGUUGGUGGCCUAGAAAAAUCAACUUGCCAAAGUUAGGCCACCAUUUGUUAAGGCCUAGAAAACACAUAAGCUGCAUUUCUAGCAGAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AACUCAUCAAGUGCAUAUCAAACCG--| AGGU UAGAAAAAUCAA
UUUCUAGGUCUUAA UGGUGGCC \
AAAGAUCCGGAAUU ACCACCGG C
UUAGACGAUCUUUACGUCGAAUACACA^ GUUU AUUGAAACCGUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Cbr-Mir-7590_5p |
| mirBase accession | MIMAT0029596 |
|---|
| Sequence |
0- AGGUCUUAAAGGUUGGUGGCC -21
Get sequence
|
|---|
| Co-mature sequence |
Cbr-Mir-7590_3p |
| mirBase accession | None |
|---|
| Sequence |
48- CCACCAUUUGUUAAGGCCUAG -69
Get sequence
|
|---|
