| MirGeneDB ID | Cbr-Mir-7593 |
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| Family name |
MIR-7593 (all species) |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-7593
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
X: 15669654-15669711 [-]
Ensembl
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| Seed |
GAGGUAU |
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Precursor
(pre-Mir +30nt flank) |
CUAUUAUUCCAAUCACAACUCACGACUGGUAAGCUUGCACGAUCACCUCUCAACCAGCACAAUGAGUUGAGGUAUUGUAAAAGCUUACUGGUCGUUUUGAGCUGCAAAUUGAUUCGAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUAUUAUUCCAAUCACAACUC--| UG GC C UCAACCAGC
ACGAC GUAAGCUU ACGAU ACCUC \
UGCUG CAUUCGAA UGUUA UGGAG A
UAGCUUAGUUAAACGUCGAGUUU^ GU AA - UUGAGUAAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-7593_5p* |
| mirBase accession | None |
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| Sequence |
0- AAGCUUGCACGAUCACCUCUCAAC -24
Get sequence
|
|---|
| Mature sequence |
Cbr-Mir-7593_3p |
| mirBase accession | MIMAT0029599 |
|---|
| Sequence |
37- UGAGGUAUUGUAAAAGCUUAC -58
Get sequence
|
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