| MirGeneDB ID | Cbr-Mir-85 |
|---|
| Family name |
MIR-85 (all species) |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-85
|
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| Paralogues |
|
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| Orthologues |
Cel-Mir-85
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| Node of Origin (locus) |
Caenorhabditis
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| Node of Origin (family) |
Caenorhabditis
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Genome context
(CB4) |
II: 3822205-3822268 [-]
Ensembl
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| Seed |
ACAAAGU |
|---|
Precursor
(pre-Mir +30nt flank) |
UAAAAAAAUCAAAAAACAGUACCCCGGUGCCCGCUUUUUCAGUAGUUUGAAACCAGAGAUGAUAGUUGGUUACAAAGUAUUUGAAAAGGCGUGCACUGGGUAAAUUUUGAAUAGACUGGUAAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UAAAAAAAUCAAAAAACAGUAC-- C -| G A CAGAGAU
CCCGGUGC CGCUUUUUC AGUA UUUG AAC \
GGGUCACG GCGGAAAAG UUAU AAAC UUG G
AGAAUGGUCAGAUAAGUUUUAAAU U U^ G A GUUGAUA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-85_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CCGCUUUUUCAGUAGUUUGAAAC -23
Get sequence
|
|---|
| Mature sequence |
Cbr-Mir-85_3p |
| mirBase accession | MIMAT0000490 |
|---|
| Sequence |
40- UACAAAGUAUUUGAAAAGGCGUGC -64
Get sequence
|
|---|
