MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-9-P16

Family name MIR-9 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-244
Paralogues Cbr-Mir-9-P14  Cbr-Mir-9-P15 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cel-Mir-9-P16  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Bilateria
Genome context
(CB4)		 I: 3161588-3161646 [+] Ensembl
Seed CUUUGGU
Precursor
(pre-Mir +30nt flank)		 
UCUAUUUUCUUUUACCCAAAUUUCUCGAUUUCUUUGGUUGUACAAAGUGGUAUGGCUCUCUUGCUCAUACCGCUUUACAGCUAAAGGAAUCGAUUGAUUUUGGAAACAUUUUGUAAGUU
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Structure
        10          20        30        40        50          
UCUAUUUUCUUUUACCC--|    UC                  CA          GCUCU 
                   AAAUU  UCGAUUUCUUUGGUUGUA  AAGUGGUAUG     \
                   UUUAG  AGCUAAGGAAAUCGACAU  UUCGCCAUAC     C
UUGAAUGUUUUACAAAGGU^    UU                  --          UCGUU 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Mature sequence

Cbr-Mir-9-P16_5p
mirBase accessionMIMAT0000502
Sequence 
0- UCUUUGGUUGUACAAAGUGGUAUG -24
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Star sequence

Cbr-Mir-9-P16_3p*
mirBase accessionNone
Sequence 
37- UACCGCUUUACAGCUAAAGGAA -59
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