| MirGeneDB ID | Cel-Mir-4806 |
|---|
| Family name |
MIR-4806 (all species) |
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| Species |
Roundworm (Caenorhabditis elegans) |
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| MiRBase ID |
cel-mir-4806
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. elegans
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| Node of Origin (family) |
C. elegans
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Genome context
(ce11) |
chrII: 12346312-12346365 [-]
UCSC
Ensembl
|
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| Seed |
ACUUACC |
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Precursor
(pre-Mir +30nt flank) |
GAAUCCAUGGCUUCGGAUUCAGUGGCGAGCCACUUACCGGCUGAGCCAUGCGCGCUGCGCUGCAUAGCUCAGCCGGUAAGAGGCUUGCCUUUGGAGCAAAAGGUCACGGUUCGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAAUCCAUGGCUUCGGA--| U A C GCGC
UUCAG GGCGAGCC CUUACCGGCUGAGC AUGC U
AGGUU CCGUUCGG GAAUGGCCGACUCG UACG G
AGCUUGGCACUGGAAAACG^ U A A UCGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Cel-Mir-4806_5p |
| mirBase accession | MIMAT0019988 |
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| Sequence |
0- CACUUACCGGCUGAGCCAUGC -21
Get sequence
|
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| Star sequence |
Cel-Mir-4806_3p* |
| mirBase accession | MIMAT0019989 |
|---|
| Sequence |
33- AUAGCUCAGCCGGUAAGAGGC -54
Get sequence
|
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