MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-52-P1

Family name MIR-52 (all species)
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-52
Paralogues Cel-Mir-52-P2 
Orthologues Cbr-Mir-52-P1 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrIV: 14034024-14034086 [+] UCSC Ensembl
Seed ACCCGUA
Precursor
(pre-Mir +30nt flank)		 
CAUAUUCAUGUUCUUCCAACUCUAACAGUCCACCCGUACAUAUGUUUCCGUGCUUGACAGCGAAGCUCAAUCACGUUACAAUGAAAGGGUAGCCGGUUAUUGAAGUUGGGUCUUUUUUGGGCG
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Structure
        10        20          30        40        50        60  
CAUAUUCAUGUUCUUCCAACUC--|   AGUCC    GUA   A   UUC    CUUGACAGC 
                        UAAC     ACCC   CAU UGU   CGUG         \
                        AUUG     UGGG   GUA ACA   GCAC         G
GCGGGUUUUUUCUGGGUUGAAGUU^   GCCGA    AAA   -   UU-    UAACUCGAA 
 120       110       100        90         80         70
Deep sequencing
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CommentAlthough the seed sequence is the same as Mir-10-P2 the remainder of the sequence is distinct enough to warrant the recognition of a distinct family.
3' NTU No
MotifsNo
Tissue expression
- +
Da Ea Mi Wi Yo Yo
Mature sequence

Cel-Mir-52-P1_5p
mirBase accessionMIMAT0000023
Sequence 
0- CACCCGUACAUAUGUUUCCGUGCU -24
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Proposed targets microrna.org: MIMAT0000023
TargetScanWorm: cel-miR-52
Star sequence

Cel-Mir-52-P1_3p*
mirBase accessionMIMAT0020311
Sequence 
41- CACGUUACAAUGAAAGGGUAGC -63
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