MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-62

Family name MIR-62 (all species)
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-62
Paralogues
Orthologues Cbr-Mir-62 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrX: 12692608-12692665 [+] UCSC Ensembl
Seed GAUAUGU
Precursor
(pre-Mir +30nt flank)		 
GAUUGACCCAUGUACUCCGGCUAUAGUGAGGUGAGUUAGAUCUCAUAUCCUUCCGCAAAAUGGAAAUGAUAUGUAAUCUAGCUUACAGGUUGUUCAACAUCCCAAAGACAGUGCUACU
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Structure
        10        20        30          40        50        
GAUUGACCCAUGUACUCCGGCUAUAGUGAG--|          CU      CUUCCGCA 
                                GUGAGUUAGAU  CAUAUC        A
                                CAUUCGAUCUA  GUAUAG        A
UCAUCGUGACAGAAACCCUACAACUUGUUGGA^          AU      UAAAGGUA 
      110       100        90        80        70        60
Deep sequencing
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CommentMir-62 is a conserved mirtron cut at both ends by the spliceosome.
3' NTU No
MotifsNo
Tissue expression
- +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-62_5p*
mirBase accessionNone
Sequence 
0- GUGAGUUAGAUCUCAUAUCCUU -22
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Mature sequence

Cel-Mir-62_3p
mirBase accessionMIMAT0000034
Sequence 
36- UGAUAUGUAAUCUAGCUUACAG -58
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Proposed targets microrna.org: MIMAT0000034
TargetScanWorm: cel-miR-62