MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-1296

Family name MIR-1296 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-1296
Paralogues
Orthologues Bta-Mir-1296  Cja-Mir-1296  Cpo-Mir-1296  Dno-Mir-1296  Eca-Mir-1296  Ete-Mir-1296  Hsa-Mir-1296  Laf-Mir-1296  Mml-Mir-1296  Mmr-Mir-1296  Ocu-Mir-1296  Pab-Mir-1296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr4: 15180118-15180182 [-] UCSC Ensembl
Seed UAGGGCC
Precursor
(pre-Mir +30nt flank)		 
UGAAAUCAGCGAAUAACCUACCUAACUGGAUUAGGGCCCUGGCUCCAUCUCCUUUAGGAAAACCUUCUGUGGGGAGUGGGGCUUUGACCCUAACCCAGCUGGGCUGUAACACUGCUGCAUUUUCU
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Structure
        10        20          30        40        50        60  
UGAAAUCAGCGAAUAACCUA--|   A    A      CCCU       U    UUUAGGAAA 
                      CCUA CUGG UUAGGG    GGCUCCA CUCC         A
                      GGGU GACC AAUCCC    UCGGGGU GAGG         C
UCUUUUACGUCGUCACAAUGUC^   C    C      AGUU       -    GGUGUCUUC 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-1296_5p
mirBase accessionMIMAT0034413
Sequence 
0- UUAGGGCCCUGGCUCCAUCUCC -22
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Proposed targets TargetScanVert: cfa-miR-1296
miRDB: MIMAT0034413
Star sequence

Cfa-Mir-1296_3p*
mirBase accessionNone
Sequence 
44- AGUGGGGCUUUGACCCUAACC -65
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