MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-4677

Family name MIR-4677 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-4677  Mml-Mir-4677  Mmr-Mir-4677  Pab-Mir-4677 
Node of Origin (locus) Primates
Node of Origin (family) Primates
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021933.1: 39082517-39082575 [-] UCSC Ensembl
Seed CUGUAAG
Precursor
(pre-Mir +30nt flank)		 
CAUGGAUGAUUUGGAGUAGCAAAGCAGCAAUUGUUCUUUGGUCUUUCAGCCAUGACCUGACCUUCUGUCUGUAAGACCAAAGAACUACUUUGCUUGGCCACCAUCUGCACUCAAGAGAG
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Structure
        10           20        30        40        50         
CAUGGAUGAUUUGGAGUA---| A      CAAUU             U   C  UGACCU 
                     GC AAGCAG     GUUCUUUGGUCUU CAG CA      \
                     CG UUCGUU     CAAGAAACCAGAA GUC GU      G
GAGAGAACUCACGUCUACCAC^ G      UCAU-             U   U  CUUCCA 
       110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Cja-Mir-4677_5p* (predicted)
mirBase accessionNone
Sequence 
0- UUGUUCUUUGGUCUUUCAGCCA -22
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Mature sequence

Cja-Mir-4677_3p (predicted)
mirBase accessionNone
Sequence 
37- UCUGUAAGACCAAAGAACUACU -59
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