| MirGeneDB ID | Cli-Mir-1781 |
|---|
| Family name |
MIR-1781 (all species) |
|---|
| Species |
Rock pigeon (Columba livia) |
|---|
| MiRBase ID |
cli-mir-1781
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Gga-Mir-1781
Tgu-Mir-1781
|
|---|
| Node of Origin (locus) |
Neognathae
|
|---|
| Node of Origin (family) |
Neognathae
|
|---|
Genome context
(colLiv2) |
scaffold146: 3197333-3197391 [+]
|
|---|
| Seed |
UUAAAUC |
|---|
Precursor
(pre-Mir +30nt flank) |
AGUAGGAAAGGCAAGACAAGGAGCUUGUUUAACAGCUGAGUGAUUUAAAGCAAUCAAAUUCCUUUAGCUUUAAAUCAUCCAGCUGUUGAACAGGCUCUUGCUUCAUUUCUCCCAAGUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGUAGGAAAGGCAAGACA--| AG AAUCAAA
AGGAGCUUGUUUAACAGCUG UGAUUUAAAGC \
UUCUCGGACAAGUUGUCGAC ACUAAAUUUCG U
CCUGAACCCUCUUUACUUCG^ CU AUUUCCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Cli-Mir-1781_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AACAGCUGAGUGAUUUAAAGC -21
Get sequence
|
|---|
| Mature sequence |
Cli-Mir-1781_3p |
| mirBase accession | MIMAT0038697 |
|---|
| Sequence |
38- UUUAAAUCAUCCAGCUGUUGA -59
Get sequence
|
|---|
