| MirGeneDB ID | Cli-Mir-2984 |
|---|
| Family name |
MIR-2984 (all species) |
|---|
| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-2984
|
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| Paralogues |
|
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| Orthologues |
Gga-Mir-2984
Tgu-Mir-2984
|
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| Node of Origin (locus) |
Neognathae
|
|---|
| Node of Origin (family) |
Neognathae
|
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Genome context
(colLiv2) |
scaffold167: 918738-918804 [+]
|
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| Seed |
GCCUGCU |
|---|
Precursor
(pre-Mir +30nt flank) |
CUCCCGCAAUGAGAGAUGCUUCACCUGCGGAGCCUGCUGGGAGCGAAAUUGAGAAAGGACAGCGCCAGCCCAGGCAAUUUCACUCACAGCGGGCACUUGCAGGUGAAGCAUGGCCAUAAAAUGCAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUCCCGCAAUGAGAGAU- -| A G C AGAAAGGACAG
GCUUCACCUGC GG GCCUGCUG GAG GAAAUUG \
CGAAGUGGACG UC CGGGCGAC CUC CUUUAAC C
CGACGUAAAAUACCGGUA U^ A A A GGACCCGACCG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Yes
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Mature sequence |
Cli-Mir-2984_5p (predicted) |
| mirBase accession | MIMAT0038715 |
|---|
| Sequence |
0- AGCCUGCUGGGAGCGAAAUUGA -22
Get sequence
|
|---|
| Star sequence |
Cli-Mir-2984_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
45- AAUUUCACUCACAGCGGGCACU -67
Get sequence
|
|---|
