| MirGeneDB ID | Cli-Mir-9623 |
|---|
| Family name |
MIR-9623 (all species) |
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| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-9623
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
C. livia
|
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| Node of Origin (family) |
C. livia
|
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Genome context
(colLiv2) |
scaffold93: 1928134-1928192 [-]
|
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| Seed |
UACCUUU |
|---|
Precursor
(pre-Mir +30nt flank) |
CACCUGUCCUUUCCUACCUAGGCCUUUUCUAGUGUGGGAUUUAAAGUUGUGUGUAACUCGUGACAGCAUACCUUUAAAUCCUGGUCUGGACAAGGUCCUAGAGUUGACAUCUCUAGCUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CACCUGUCCUUUCCUAC- -| U UG U GUAACU
CUAGG CCUU UCUAG UGGGAUUUAAAG UGUGU \
GAUCC GGAA AGGUC GUCCUAAAUUUC AUACG C
GUCGAUCUCUACAGUUGA U^ C UG C ACAGUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Cli-Mir-9623_5p* |
| mirBase accession | MIMAT0038737 |
|---|
| Sequence |
0- AGUGUGGGAUUUAAAGUUGUGU -22
Get sequence
|
|---|
| Mature sequence |
Cli-Mir-9623_3p |
| mirBase accession | MIMAT0038738 |
|---|
| Sequence |
37- AUACCUUUAAAUCCUGGUCUGG -59
Get sequence
|
|---|
