| MirGeneDB ID | Cpo-Mir-12074 |
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| Family name |
MIR-12074 (all species) |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-12074
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. porcellus
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| Node of Origin (family) |
C. porcellus
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Genome context
(cavPor3) |
scaffold_143: 1245387-1245446 [+]
UCSC
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| Seed |
CUGAAAU |
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Precursor
(pre-Mir +30nt flank) |
UACAGAUUGAGCAUUCAAAAUCUGAAAGGCUCUGAAAUCUUAAACUUGUUGAGUGCUGACAUGACACCCAGAAGUUUCAGAUUUUAGAGCAUUUUGGAUUUCAAAUCCUCGGAUUAGAGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UACAGAUUGAGCAUUCA--| UG G U G A GCUGA
AAAUC AAA GCUCUGAAAUCU AAACUU UUG GU \
UUUAG UUU CGAGAUUUUAGA UUUGAA GAC CA C
GGAGAUUAGGCUCCUAAAC^ GU A C - C CAGUA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
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| Mature sequence |
Cpo-Mir-12074_5p |
| mirBase accession | MIMAT0047449 |
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| Sequence |
0- UCUGAAAUCUUAAACUUGUUGAGU -24
Get sequence
|
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| Co-mature sequence |
Cpo-Mir-12074_3p |
| mirBase accession | MIMAT0047450 |
|---|
| Sequence |
37- CCAGAAGUUUCAGAUUUUAGAGC -60
Get sequence
|
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