| MirGeneDB ID | Cpo-Mir-12076 |
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| Family name |
MIR-12076 (all species) |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-12076
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. porcellus
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| Node of Origin (family) |
C. porcellus
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Genome context
(cavPor3) |
scaffold_3: 1597129-1597188 [+]
UCSC
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| Seed |
CUGGCCC |
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Precursor
(pre-Mir +30nt flank) |
AUAAGAUUCUUUCCCUUGCCCAUCCCGGCCCCUGGCCCGGCAGUGUUUGGCUCUGUCUGUGUGAACCUCAAGCUCUGCCUGACCAGAGGGCCGGGGUGGUGUCACCCUGAGGUGUCCCCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUAAGAUUCUUUCCCUU- - -| CCC U CUCUGUCU
GC CCAUCCCGGCCC CUGG GGCAG GUUUGG \
UG GGUGGGGCCGGG GACC CCGUC CGAACU G
UCCCCUGUGGAGUCCCAC U A^ AGU U CCAAGUGU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
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| Mature sequence |
Cpo-Mir-12076_5p |
| mirBase accession | MIMAT0047453 |
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| Sequence |
0- CCUGGCCCGGCAGUGUUUGGC -21
Get sequence
|
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| Star sequence |
Cpo-Mir-12076_3p* |
| mirBase accession | MIMAT0047454 |
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| Sequence |
38- CAAGCUCUGCCUGACCAGAGGG -60
Get sequence
|
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