MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-148-P3

Family name MIR-148 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-152
Paralogues Cpo-Mir-148-P1  Cpo-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cja-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Laf-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmr-Mir-148-P3  Mmu-Mir-148-P3  Neu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(cavPor3)		 scaffold_53: 9067371-9067431 [+] UCSC
Seed CAGUGCA
Precursor
(pre-Mir +30nt flank)		 
CCGAGGAGGCGGGCGCCUGUCCCCCCAGCCCAGGUUCUGUGAUACACUCAGACUCGGACUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGCCAGGAGGACGUUCCUCACCCGCGGGCCUG
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Structure
        10          20        30        40        50        60 
CCGAGGAGGCGGGCGCCU--|   C  CA             G  A    CA    CGGACU 
                    GUCC CC  GCCCAGGUUCUGU AU CACU  GACU      \
                    CAGG GG  CGGGUUCAAGACA UA GUGA  CUGA      C
GUCCGGGCGCCCACUCCUUG^   A  AC             G  C    --    CGAGGU 
 .       110       100        90        80          70
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-148-P3_5p*
mirBase accessionMIMAT0047032
Sequence 
0- CAGGUUCUGUGAUACACUCAGACU -24
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Mature sequence

Cpo-Mir-148-P3_3p
mirBase accessionMIMAT0047033
Sequence 
39- UCAGUGCAUGACAGAACUUGGG -61
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