| MirGeneDB ID | Cpo-Mir-2355 |
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| Family name |
MIR-2355 (all species) |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-2355
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| Paralogues |
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| Orthologues |
Bta-Mir-2355
Cfa-Mir-2355
Cja-Mir-2355
Dno-Mir-2355
Ete-Mir-2355
Hsa-Mir-2355
Laf-Mir-2355
Mml-Mir-2355
Mmr-Mir-2355
Ocu-Mir-2355
Pab-Mir-2355
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(cavPor3) |
scaffold_13: 40713701-40713767 [-]
UCSC
|
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| Seed |
UCCUCAG |
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Precursor
(pre-Mir +30nt flank) |
UAGAAAAUAACAUUGUCAGUCAGCCACGCUGUCCUCAGAUACAAUGGACAAUAUGCUAUUAUAAUUGCACGGCAUUGUCCUUGCUGUUUGGAGAUAAUACUGUUGACAGUAUUCCUCUCAUACAUGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UAGAAAAUAACAUUGUCA-- CACGC CU -| U AUGCUAUUAU
GUCAGC UGUC CAGAUA CAA GGACAAU \
CAGUUG AUAG GUUUGU GUU CCUGUUA A
UGUACAUACUCUCCUUAUGA UCAUA AG C^ - CGGCACGUUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
| |
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| Mature sequence |
Cpo-Mir-2355_5p (predicted) |
| mirBase accession | MIMAT0047429 |
|---|
| Sequence |
0- GUCCUCAGAUACAAUGGACAAU -22
Get sequence
|
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| Co-mature sequence |
Cpo-Mir-2355_3p (predicted) |
| mirBase accession | MIMAT0047430 |
|---|
| Sequence |
45- UGUCCUUGCUGUUUGGAGAUAA -67
Get sequence
|
|---|
