| MirGeneDB ID | Cpo-Mir-491 |
|---|
| Family name |
MIR-491 (all species) |
|---|
| Species |
Guinea pig (Cavia porcellus) |
|---|
| MiRBase ID |
cpo-mir-491
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-491
Cfa-Mir-491
Cja-Mir-491
Dno-Mir-491
Eca-Mir-491
Hsa-Mir-491
Mml-Mir-491
Mmr-Mir-491
Mmu-Mir-491
Ocu-Mir-491
Pab-Mir-491
Rno-Mir-491
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(cavPor3) |
scaffold_21: 452989-453044 [-]
UCSC
|
|---|
| Seed |
GUGGGGA |
|---|
Precursor
(pre-Mir +30nt flank) |
UGGCUGCUGUGGGCAUUGACUUAGCUGGGCAGUGGGGAACCCUUCCAUGAGGAGUAGAACACUCCUUAUGUAAGAUUCCCCUCUGCCUGGCUGGGUUGGAGUCAUAGCCUCCUCUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGGCUGCUGUGGGCAUU--| UG U CC C GUAG
GACUUAGC GGCAG GGGGAA CUU CAUGAGGA \
UUGGGUCG CCGUC CCCCUU GAA GUAUUCCU A
GUCUCCUCCGAUACUGAGG^ GU U A- U CACA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Cpo-Mir-491_5p |
| mirBase accession | MIMAT0047285 |
|---|
| Sequence |
0- AGUGGGGAACCCUUCCAUGAGGA -23
Get sequence
|
|---|
| Star sequence |
Cpo-Mir-491_3p* (predicted) |
| mirBase accession | MIMAT0047286 |
|---|
| Sequence |
34- CUUAUGUAAGAUUCCCCUCUGC -56
Get sequence
|
|---|
