| MirGeneDB ID | Cpo-Mir-744 |
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| Family name |
MIR-744 (all species) |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-744
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| Paralogues |
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| Orthologues |
Bta-Mir-744
Cfa-Mir-744
Cja-Mir-744
Dno-Mir-744
Eca-Mir-744
Ete-Mir-744
Hsa-Mir-744
Laf-Mir-744
Mml-Mir-744
Mmr-Mir-744
Mmu-Mir-744
Ocu-Mir-744
Pab-Mir-744
Rno-Mir-744
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(cavPor3) |
scaffold_61: 4870323-4870400 [-]
UCSC
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| Seed |
GCGGGGC |
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Precursor
(pre-Mir +30nt flank) |
GGAAGAGGCAGCGCACUGGGCUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUUACUGAAGGUUUCCUGGAAACCACACACAUGCUGUUGCCACUAACCUCAACCUUACUCGGUCCUGACCGGCUCGGCUUCUGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GGAAGAGGCAGCGCACU--| C GC C - U GUCUUACUGAAGGUUU
GGGCUGGG AAGGU GGGG UAG GGC AACAGCA \
CCUGGCUC UUCCA CUCC AUC CCG UUGUCGU C
UGUCUUCGGCUCGGCCAGU^ A A- A A - ACACACACCAAAGGUC
130 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | Although the 3' uridine is templated the 3' DcRNA reads when present suggest that this is a Group 2 miRNA. |
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| 3' NTU |
Yes
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
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| Mature sequence |
Cpo-Mir-744_5p |
| mirBase accession | MIMAT0047379 |
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| Sequence |
0- UGCGGGGCUAGGGCUAACAGCA -22
Get sequence
|
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| Star sequence |
Cpo-Mir-744_3p* |
| mirBase accession | MIMAT0047380 |
|---|
| Sequence |
57- CUGUUGCCACUAACCUCAACC -78
Get sequence
|
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