| MirGeneDB ID | Dan-Mir-1007 |
| Family name |
MIR-1007 (all species) |
| Species |
Fruit fly (Drosophila ananassae) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Dme-Mir-1007
Dsi-Mir-1007
Dya-Mir-1007
|
| Node of Origin (locus) |
D. melanogaster group
|
| Node of Origin (family) |
D. melanogaster group
|
Genome context (Dana_caf1) |
scaffold_13334: 1054393-1054454 [+]
Ensembl
|
| Seed |
AAGCUCA |
Precursor (pre-Mir +30nt flank) |
CCGGGGACGACGACAACGAAUCCGUACAGUGUAAGCAGUGUUUGAACUCGAUCUUGGAAUAGCUCCCGAUAAGCUCAAUUAACUGUUUGCAGCCGAUGGCAUCUUCUCGGAGAAUCGACGUC
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
CCGGGGACGACGACAAC-- AU ACAG GU-| A CG UUGGAA
GA CCGU UGUAAGCAGU UUGA CU AUC U
CU GGUA ACGUUUGUCA AACU GA UAG A
CUGCAGCUAAGAGGCUCUU AC GCCG AUU^ C A- CCCUCG
120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | No |
Tissue expression
|
|
| Star sequence |
Dan-Mir-1007_5p* |
| mirBase accession | None |
| Sequence |
0- GUAAGCAGUGUUUGAACUCGAUC -23
Get sequence
|
| Mature sequence |
Dan-Mir-1007_3p |
| mirBase accession | None |
| Sequence |
39- UAAGCUCAAUUAACUGUUUGCAG -62
Get sequence
|