| MirGeneDB ID | Dan-Novel-16 |
|---|
| Family name |
DAN-NOVEL-16 (all species) |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
D. ananassae
|
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| Node of Origin (family) |
D. ananassae
|
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Genome context
(Dana_caf1) |
scaffold_13322: 1691-1751 [+]
Ensembl
|
|---|
| Seed |
GUCAGGG |
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Precursor
(pre-Mir +30nt flank) |
UUCACUCGAGGAACUAACAAAUUCAAUUUCAUGCCCGCUUGCCCUCGUGACUUUGGAAAAUGGCGGAAAAGUCAGGGGGGAAGUGGGCUGAAAUCGGAGCAAAAUCAAGCCAGUUCCGGUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUCACUCGAGGAACUAACAAA--| A U G G GGAAAA
UUC AUUUCA GCCCGCUU CCCUC UGACUUU \
AGG UAAAGU CGGGUGAA GGGGG ACUGAAA U
CUGGCCUUGACCGAACUAAAACG^ C - - G AGGCGG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Dan-Novel-16_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUGCCCGCUUGCCCUCGUGACUUU -24
Get sequence
|
|---|
| Mature sequence |
Dan-Novel-16_3p |
| mirBase accession | None |
|---|
| Sequence |
39- AGUCAGGGGGGAAGUGGGCUGA -61
Get sequence
|
|---|
