MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-551-P2

Family name MIR-551 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cja-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dno-Mir-551-P2  Eca-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Laf-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmr-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Neu-Mir-551-P2  Oan-Mir-551-P2  Ocu-Mir-551-P2  Pab-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr15: 35287289-35287345 [+] UCSC Ensembl
Seed CGACCCA
Precursor
(pre-Mir +30nt flank)		 
CAUAACAUCUGACGAUCCUGUGUUGCCUUAGAAACCAAGCAUGGGUGUGGCCUGAAUCCUCCAAUGGCGACCCAUCCUUGGUUUCUGAGGCUGUACAGAAAGACACACUGGCAGAUC
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Structure
        10          20        30        40        50         
CAUAACAUCUGACGAUC--|    UU               C      GUG   UGAAUC 
                   CUGUG  GCCUUAGAAACCAAG AUGGGU   GCC      \
                   GACAU  CGGAGUCUUUGGUUC UACCCA   CGG      C
CUAGACGGUCACACAGAAA^    GU               C      G--   UAACCU 
     110       100        90        80        70          60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-551-P2_5p*
mirBase accessionNone
Sequence 
0- GAAACCAAGCAUGGGUGUGGCCU -23
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Mature sequence

Dre-Mir-551-P2_3p
mirBase accessionNone
Sequence 
36- GCGACCCAUCCUUGGUUUCUG -57
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