| MirGeneDB ID | Dsi-Mir-986 |
|---|
| Family name |
MIR-986 (all species) |
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| Species |
Fruit fly (Drosophila simulans) |
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| MiRBase ID |
dsi-mir-986
|
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| Paralogues |
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| Orthologues |
Dan-Mir-986
Dme-Mir-986
Dya-Mir-986
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| Node of Origin (locus) |
D. melanogaster group
|
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| Node of Origin (family) |
D. melanogaster group
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Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel) |
2R: 5147136-5147203 [+]
UCSC
Ensembl
|
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| Seed |
CUCGAAU |
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Precursor
(pre-Mir +30nt flank) |
CCACGCAGAGGACACACCUGAAAUUACCCAUCUCGAAUAGCGUUGUGACUGAGGUAACUGCGCAUCGAAUCUACUCAGCGGCGAGGCUAUUCCAGUAAGGUUGUUUUGGGCCAGCGACUUUAUGACCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCACGCAGAGGACACAC--|UG U CAU C G GA GGUAACUGCG
C AAAU ACC CU GAAUAGC UUGU CUGA C
G UUUG UGG GA CUUAUCG AGCG GACU A
GCCAGUAUUUCAGCGACCG^GU U AAU C G GC CAUCUAAGCU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a single snp between the mirbase entry and this entry. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dsi-Mir-986_5p |
| mirBase accession | MIMAT0012431 |
|---|
| Sequence |
0- UCUCGAAUAGCGUUGUGACUGA -22
Get sequence
|
|---|
| Star sequence |
Dsi-Mir-986_3p* |
| mirBase accession | MIMAT0012432 |
|---|
| Sequence |
46- AGCGGCGAGGCUAUUCCAGUAA -68
Get sequence
|
|---|
