| MirGeneDB ID | Ebu-Mir-135-P10 |
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| Family name |
MIR-135 (all species) |
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| Species |
Inshore hagfish (Eptatretus burgeri) |
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| MiRBase ID |
|
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| Paralogues |
Ebu-Mir-135-P9
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| Orthologues |
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| Node of Origin (locus) |
E. burgeri
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| Node of Origin (family) |
Chordata
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Genome context
(Eburgeri_3) |
FYBX02010664.1: 1778976-1779034 [+]
UCSC
Ensembl
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| Seed |
AUGGCUU |
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Precursor
(pre-Mir +30nt flank) |
GAGGCAGCGGGAUAAAUCACGGCUGUGUUUUAUGGCUUUUUAUUCCUAUGUGAGGGUAUGCAGUGUUGCGUAGGGGUGAAAGCCAUUGAAUACGCCGUGAAAGCACAGCGAUAAAGUCG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GAGGCAGCGGGAUAAAU---| U U U UG GGGUA
CACGGC GUGUUU AUGGCUUUU AUUCCUAUG A U
GUGCCG CAUAAG UACCGAAAG UGGGGAUGC U G
GCUGAAAUAGCGACACGAAA^ - U - GU GUGAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Ebu-Mir-135-P10_5p |
| mirBase accession | None |
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| Sequence |
0- UAUGGCUUUUUAUUCCUAUGUGA -23
Get sequence
|
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| Star sequence |
Ebu-Mir-135-P10_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
37- GCGUAGGGGUGAAAGCCAUUGA -59
Get sequence
|
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