MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-138-P3

Family name MIR-138 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-138-P4 
Orthologues Pma-Mir-138-o3 
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010311.1: 2672414-2672470 [+] UCSC Ensembl
Seed GCUGGUG
Precursor
(pre-Mir +30nt flank)		 
CUGCAAAAUCGACAAAAGGAGCUGCGCUGCAGCUGGUGUUGUGAAUCAGGCCGUGGAAUGAUUCCGACCGUUUCGCGACACCAGGGCUGUGCUGCUCUACUAGCAGCGAUAGCAGCU
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Structure
        10          20        30        40        50         
CUGCAAAAUCGACAAAA--|    U    U  AG             UCA  C  UGGAA 
                   GGAGC GCGC GC  CUGGUGUUGUGAA   GG CG     \
                   UCUCG CGUG CG  GACCACAGCGCUU   CC GC     U
UCGACGAUAGCGACGAUCA^    U    U  G-             UG-  A  CUUAG 
     110       100        90         80        70         60
Deep sequencing
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CommentHere the single read of the 3p arm has a untemplated adenosine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ebu-Mir-138-P3_5p
mirBase accessionNone
Sequence 
0- AGCUGGUGUUGUGAAUCAGGCCG -23
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Star sequence

Ebu-Mir-138-P3_3p*
mirBase accessionNone
Sequence 
36- ACCGUUUCGCGACACCAGGGC -57
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