| MirGeneDB ID | Ebu-Mir-221-P2e |
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| Family name |
MIR-221 (all species) |
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| Species |
Inshore hagfish (Eptatretus burgeri) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. burgeri
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| Node of Origin (family) |
Vertebrata
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Genome context
(Eburgeri_3) |
FYBX02010127.1: 1809220-1809281 [-]
UCSC
Ensembl
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| Seed |
GCUACAU |
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Precursor
(pre-Mir +30nt flank) |
GACAAGACAAACGUCCAGUGCUGCCCGCUGACCCAGCACACAUUGUAGAAUCCUGUGCCCUACAUGCAACAGCUACAUUGUCUGCUGGGUUAGUGUGCAGUUUUAUCAGCAUGAACGUCAAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GACAAGACAAACGUCCAGU--| C C U AAUC GCCCU
GCUGC CGCUGACCCAGCA ACA UGUAG CUGU A
UGACG GUGAUUGGGUCGU UGU ACAUC GACA C
UAACUGCAAGUACGACUAUUU^ U C U ---- ACGUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | No |
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Tissue expression
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| Star sequence |
Ebu-Mir-221-P2e_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- ACCCAGCACACAUUGUAGAAUCCUGU -26
Get sequence
|
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| Mature sequence |
Ebu-Mir-221-P2e_3p |
| mirBase accession | None |
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| Sequence |
40- AGCUACAUUGUCUGCUGGGUUA -62
Get sequence
|
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