MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-1995-P1

Family name MIR-1995 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-1995-P2 
Orthologues Cte-Mir-1995  Ofu-Mir-1995  Pdu-Mir-1995  Snu-Mir-1995 
Node of Origin (locus) E. fetida
Node of Origin (family) Annelida
Genome context
(Efe_combined)		 Efet.01.89326: 472-531 [-]
Seed UACAUCU
Precursor
(pre-Mir +30nt flank)		 
UCCAAUACUAAUUUUCGUCGGGAAAUGUCGCUACAUCUCACAUUGCGAGCGUUUAGCUCAGAAACAACGAUCGCAGUCAGAGAUGUGAUAAUAUUACCCGAUCAACGACAACUCUUCCAU
Get precursor sequence
Structure
        10          20        30        40        50         
UCCAAUACUAAUUUUCG--|    A     CGC        AC       G   UUAGCU 
                   UCGGG AAUGU   UACAUCUC  AUUGCGA CGU      C
                   AGCCC UUAUA   GUGUAGAG  UGACGCU GCA      A
UACCUUCUCAACAGCAACU^    A     AUA        AC       A   ACAAAG 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Efe-Mir-1995-P1_5p
mirBase accessionNone
Sequence 
0- CUACAUCUCACAUUGCGAGCGU -22
Get sequence
Star sequence

Efe-Mir-1995-P1_3p*
mirBase accessionNone
Sequence 
38- GAUCGCAGUCAGAGAUGUGAUA -60
Get sequence