| MirGeneDB ID | Efe-Mir-1997-P4 |
|---|---|
| Family name | MIR-1997 (all species) |
| Species | Common brandling worm (Eisenia fetida) |
| MiRBase ID | |
| Paralogues | Efe-Mir-1997-P1 Efe-Mir-1997-P2 Efe-Mir-1997-P3 Efe-Mir-1997-P5 |
| Orthologues | Cte-Mir-1997 Dgr-Mir-1997 Pdu-Mir-1997 Snu-Mir-1997 |
| Node of Origin (locus) | E. fetida |
| Node of Origin (family) | Sipuncula + Pleistoannelida |
| Genome context (Efe_combined) |
|
| Seed | GGCUGAU |
| Precursor (pre-Mir +30nt flank) |
CGGCUGAUGAAACUUACAAAGUUGUCGUUCUGAUAUGGACUCUGCAGGUUUUAUCAGCCCUAGet precursor sequence |
| Structure | 10 20 C-- A A ---| GU GGCUGAUGAAACUU CA AGUU GUC \ CCGACUAUUUUGGA GU UCAG UAG U AUC C C GUA^ UC 60 50 40 30 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Efe-Mir-1997-P4_5p |
| mirBase accession | None |
| Sequence |
0- CGGCUGAUGAAACUUACAAAGU -22
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|
| Star sequence | Efe-Mir-1997-P4_3p* |
| mirBase accession | None |
| Sequence |
40- UCUGCAGGUUUUAUCAGCCCUA -62
Get sequence
|
