MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-2685-P1b

Family name MIR-2685 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2685-P1a  Efe-Mir-2685-P2 
Orthologues Cte-Mir-2685-P1  Pdu-Mir-2685 
Node of Origin (locus) E. fetida
Node of Origin (family) Pleistoannelida
Genome context
(Efe_combined)		 Efe-Mir-2685-P2b_manual_assembly: 37-98 [+]
Seed AACUCAG
Precursor
(pre-Mir +30nt flank)		 
UGUGUGUGUGUGUGUGUGUGUGUGUCUGUGGUGUCGCCCGAUCCGAGUUAUGCAGUGACUGGAAUUGCUCAUAACUCAGUCAGACCACACCAUGGCCUCUAUGCAGCUCAUGACUCCUCCUC
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Structure
        10         20         30        40        50        60 
UGUGUGUGUGUGUGUGU-     UGU-|        CGCCC   CC        CAGUGACU 
                  GUGUG    CUGUGGUGU     GAU  GAGUUAUG        \
                  CGUAU    GGUACCACA     CUG  CUCAAUAC        G
CUCCUCCUCAGUACUCGA     CUCC^        CCAGA   A-        UCGUUAAG 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
To
Star sequence

Efe-Mir-2685-P1b_5p*
mirBase accessionNone
Sequence 
0- GUGUCGCCCGAUCCGAGUUAUG -22
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Mature sequence

Efe-Mir-2685-P1b_3p
mirBase accessionNone
Sequence 
41- UAACUCAGUCAGACCACACCA -62
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