| MirGeneDB ID | Emu-Mir-2015 |
|---|
| Family name |
MIR-2015 (all species) |
|---|
| Species |
Muellers freshwater sponge (Ephydatia muelleri) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aqu-Mir-2015
|
|---|
| Node of Origin (locus) |
Demospongiae
|
|---|
| Node of Origin (family) |
Demospongiae
|
|---|
Genome context
(GCA_013339895_Emu) |
JABACO010000002.1: 17506160-17506226 [-]
|
|---|
| Seed |
CAUGUAU |
|---|
Precursor
(pre-Mir +30nt flank) |
UUGGCGACAUGGAUAAAGAGCAGUGUCUUGUCAUGUAUUGUGGAGGGGAGAGGGUCAAAUGUGGCCACACUUCCUCUCCUCUUCAUAAUGCAUGCCAAGGCCUUCUUUUGACAUCCGGCAGCUCACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUGGCGACAUGGAUAAA---| C U U GGGUCAAAUGU
GAG AG GUCUUG CAUGUAUUGUGGAGGGGAGA \
UUC UC CGGAAC GUACGUAAUACUUCUCCUCU G
ACACUCGACGGCCUACAGUU^ U - C CCUUCACACCG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Emu-Mir-2015_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UCAUGUAUUGUGGAGGGGAGA -21
Get sequence
|
|---|
| Star sequence |
Emu-Mir-2015_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
46- UCCUCUUCAUAAUGCAUGCCA -67
Get sequence
|
|---|
