| MirGeneDB ID | Esc-Mir-12512 |
|---|
| Family name |
MIR-12512 (all species) |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Obi-Mir-12512
Ovu-Mir-12512
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044525.1: 37420478-37420535 [+]
Ensembl
|
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| Seed |
CCGCUGU |
|---|
Precursor
(pre-Mir +30nt flank) |
UGUAAGUGUUGUAAGUUUUGACAAAGGCGGAGGUUAACCGGAUAAGCGUCCUGUUGUCUUGAAAAGACCGCUGUUCCAGUUCAUCUUCGUCUAACCUCAAUGAACCACACGUCAGAUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGUAAGUGUUGUAAGUU- CAA-| U C UA UC GUUGU
UUGA AGGCGGAGGU AAC GGA AGCG CU C
AACU UCUGCUUCUA UUG CCU UCGC GA U
AUAGACUGCACACCAAGU CCAA^ C A UG CA AAAGU
110 100 90 80 70 60 |
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| Deep sequencing |
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Esc-Mir-12512_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGUUAACCGGAUAAGCGUCCU -22
Get sequence
|
|---|
| Mature sequence |
Esc-Mir-12512_3p |
| mirBase accession | None |
|---|
| Sequence |
36- ACCGCUGUUCCAGUUCAUCUUC -58
Get sequence
|
|---|
