| MirGeneDB ID | Esc-Mir-12525 |
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| Family name |
MIR-12525 (all species) |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Obi-Mir-12525
Ovu-Mir-12525
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044525.1: 2505837-2505898 [-]
Ensembl
|
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| Seed |
GACAUAA |
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Precursor
(pre-Mir +30nt flank) |
AAUGAACCGAAAAUUUACUCGCAGAGUAUUUGACAUAACUUGGAACUCUAAAGUUGUUUUUGUUAGAACUUAGAAUUCCAGGUUACGCCAGCCAUUCUCGAGAAAGAUCAACAUCCUGAUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAUGAACCGAAAAUUUA---| C AU ACA C AGUUGUUU
CUCG AGAGU UUG UAACUUGGAA UCUAA U
GAGC UCUUA GAC AUUGGACCUU AGAUU U
ACUAGUCCUACAACUAGAAA^ - CC CGC A CAAGAUUG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Esc-Mir-12525_5p |
| mirBase accession | None |
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| Sequence |
0- UGACAUAACUUGGAACUCUAAA -22
Get sequence
|
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| Star sequence |
Esc-Mir-12525_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- UAGAAUUCCAGGUUACGCCAGC -62
Get sequence
|
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