| MirGeneDB ID | Esc-Mir-12541 |
|---|
| Family name |
MIR-12541 (all species) |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Obi-Mir-12541
Ovu-Mir-12541
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044490.1: 154134208-154134271 [-]
Ensembl
|
|---|
| Seed |
UCGGCUC |
|---|
Precursor
(pre-Mir +30nt flank) |
GCAGACGCAGUAGAUUAUUUAAAUAUACCAAAGAAUCACCAUGAGCCGGGGUCGUAUUUUAAUCUUGGCGCGAUCGGCUCGAGGCAGUUCUUCGGCAUAUUUGACAUCACUCAACACACCUUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCAGACGCAGUAGAUUAU--| A A CA A GG UAUUUUA
UUAAAUAU CC AAGAAU CC UGAGCCG GUCG A
AGUUUAUA GG UUCUUG GG GCUCGGC UAGC U
AAUUCCACACAACUCACUAC^ C C AC A -- GCGGUUC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Esc-Mir-12541_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAGAAUCACCAUGAGCCGGGGUCG -24
Get sequence
|
|---|
| Mature sequence |
Esc-Mir-12541_3p |
| mirBase accession | None |
|---|
| Sequence |
42- AUCGGCUCGAGGCAGUUCUUCG -64
Get sequence
|
|---|
